Integrations premium

Most clinical environments are not greenfield. An EMR, a lab system, a device platform, a legacy database — each with its own data format, its own API, its own idea of what a "patient" looks like. Getting data into Atomik means bridging that gap reliably, not just once.

Integration needs come in two forms:

  • Legacy migration — extracting historical clinical and demographic data from existing systems, transforming it to openEHR structures, and loading it into Atomik as a one-time or phased migration.
  • Live integration — ongoing data flow between Atomik and other systems: an EMR pushing new records, a device platform streaming wearable data, a CDS system receiving query results in real time.

Neither is simple. Source data arrives with inconsistencies — missing fields, non-standard codes, conflicting patient identifiers. Every integration requires custom transformation and mapping rules that match the specific shape of your source data to the openEHR data model. There is no one-size-fits-all connector.

CaboLabs specializes in both types. We use an Integration Engine that handles the underlying connectivity — HL7 v2, REST, custom formats — while giving us full freedom to define the transformation and mapping logic per data source. If you have a use case that requires integrating systems or data with Atomik, get in contact and we'll scope the work with you.

FHIR interoperability

Many healthcare systems — particularly in markets where FHIR adoption is mandated or widespread — need to expose or consume FHIR APIs alongside an openEHR backend. Atomik doesn't implement FHIR natively, but the CaboLabs platform includes a FHIR Server facade that connects to Atomik and enables bidirectional operations: FHIR resources in, openEHR data out, and vice versa.

This isn't a generic FHIR-to-openEHR converter. The mapping layer is adapted to your specific openEHR templates and FHIR profiles and extensions — because a one-size-fits-all translation doesn't exist when both sides have custom models. The result is a FHIR-compatible interface backed by Atomik's versioned, auditable, standards-compliant CDR.

If your project requires FHIR interoperability, include that in your initial contact — it shapes the architecture discussion from the start.